Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921854.1_cds_XP_016470744.1_63159
CDS Infomation

[gene=LOC107792990] [db_xref=GeneID:107792990] [protein=TBC1 domain family member 15-like] [protein_id=XP_016470744.1] [location=join(19007..19120,20602..20697,20876..20979,21056..21228,21365..21442,21790..21912,22002..22090,22321..22426,22775..22872,22991..23248,23393..23476,23892..23912)] [gbkey=CDS]
Sequence

ATGACAACTTTAGATATTTCGAAAATGTGGAGGGATCCTGGTGCTCCGGCTGATTCATTT
TATCAGGTTCGCCCTGAATGTACAGATGTTCCCAAGTCCAAGTTTAGAATCAAGAACGGA
AAAACTCTAAGCGCAAGAAAATGGCGTGCTGCATTTTCCCCTGAAGGTTATCTTGATATA
GGCAAAACACTTGGTCGAATCCATCGTGGGGGAATTCATCCATCAATTAGAGGTGAAGTT
TGGGAATTCTTACTTGGTTGCTACGATCCAAAGAGCACGTATGCAGAACGAGAGGATATA
CGAAAGCTACGGAGGACACAATATGCTGTATTAAAAGAAGAATGCCACACAATGTTTCCG
ACGATTGGAAGCGGTAGATTTATTACTGCACCTGTAATAACAGAAGATGGTGATCCCATT
TTAGATCCTTTAGTACTTCAAGAGGCAAATGCAGCGAAAGAAGCGACTTCAGCTGGTCAA
GCAAATGGTGATTCCAGTGGTTTTGAAATGGTAAAGGAACATGACAAAAGAGTAATAGAG
TGGAAACTCTCATTACACCAAATAGGACTCGATGTGGCTCGCACAGACAGGTCACTCGTG
TTTTATGAGAAACAAGAGAATCTATCAAAGCTTTGGGATATCCTTTCTGTGTATGCTTGG
TTTGACAAAGATGTTAATTATTGTCAAGGGATGAGTGATCTTTGCTCGCCCATGATTATT
CTTCTTGACGATGAAGCAGATGCGTTCTGGTGCTTTGAACGTTTAATGAGGAGACTGAGA
GGCAATTTCAGATACACCGAGAGTTCCGTTGGCGTAGAATCACAGCTAAATAAACTAGCT
TCAGTAACTCAAGTTATTGATCCCAAACTTCACCAACACTTAGATAAATTAGGTGGAGGT
GATTATCTGTTTGCTGTTCGGATGCTCATGGTTTTGTTTCGCCGAGAGTTTTCCTTTTGT
GATTCATTATATCTTTGGGAGATGATGTGGGCACTGGAATTTGATCCGGACTTGTTTCTT
TTGTATGAAGATCCTGAATTAGTTGCTGAAAAATCTGAAGAATCTAAATCTAAATCAAAA
TCGCGCCATATTGGGAAATACGAGCGAGAAAACATGAAAAATGGTGGCAAAGCTTCAGAA
GCTCCCCTACCGATATCTGTTTTTCTAGTAGCCAGTGTCCTGAAAGACAAGAGCGATAAG
TTGCTGACAGAAGCAAGAGGACTAGACGACGTTGTTAAGATACTGAATGATGTTAATGGA
AACCTGGATGCTAAAAAGGCTTGCACTGGTGCAATGAAACTTCACAAGAAGTATCTTAAA
AAGGCGGCCAACACCAACAGGTAG

Peptide Sequence

PEP ID

XP_016470744.1
PEP Infomation

PREDICTED: TBC1 domain family member 15-like [Nicotiana tabacum]
Sequence

MTTLDISKMWRDPGAPADSFYQVRPECTDVPKSKFRIKNGKTLSARKWRAAFSPEGYLDI
GKTLGRIHRGGIHPSIRGEVWEFLLGCYDPKSTYAEREDIRKLRRTQYAVLKEECHTMFP
TIGSGRFITAPVITEDGDPILDPLVLQEANAAKEATSAGQANGDSSGFEMVKEHDKRVIE
WKLSLHQIGLDVARTDRSLVFYEKQENLSKLWDILSVYAWFDKDVNYCQGMSDLCSPMII
LLDDEADAFWCFERLMRRLRGNFRYTESSVGVESQLNKLASVTQVIDPKLHQHLDKLGGG
DYLFAVRMLMVLFRREFSFCDSLYLWEMMWALEFDPDLFLLYEDPELVAEKSEESKSKSK
SRHIGKYERENMKNGGKASEAPLPISVFLVASVLKDKSDKLLTEARGLDDVVKILNDVNG
NLDAKKACTGAMKLHKKYLKKAANTNR

Transcript Sequence

Gene sequence data has not been registered.